alphafold3蛋白质和DNA相互作用(一)8ilw 双链 json模板
2024-11-22 01:14:27
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从https://www.rcsb.org/fasta/entry/6JVX /display获取fasta文件,生成以下json,提交任务,其他参考,蛋白质和小分子的步骤
(AF3) [chenfj@s61b04n01 testaf3]$ cat 8ilw.json
{
"name": "8ILW",
"modelSeeds": [1, 22, 333, 4444, 66666],
"sequences": [
{"protein": {
"id": "A",
"sequence": "KRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLAR"
}
},
{
"dna": {
"id": "B",
"sequence": "CAACACTTAATCCAAA"
}
},
{
"dna": {
"id": "C",
"sequence": "GTTTGGATTAAGTGTT"
}
}
],
"dialect": "alphafold3",
"version": 1
}